Genomic testing and counseling: The contribution of next generati | 50092

Journal of Neurology & Neurophysiology

ISSN - 2155-9562

Genomic testing and counseling: The contribution of next generation sequencing to epilepsy genetics

31st Clinical Neuroscience and Neurogenetics Conference: Mobilizing Neurons to Rehabilitate

August 13-14, 2018 Dubai, UAE

Lamia F Alsubaie, Taghreed Aloraini and Ahmed Alfares

King Abdulaziz Medical City, KSA
Qassim University, KSA

Scientific Tracks Abstracts: J Neurol Neurophysiol

Abstract :

Background: Next-generation sequencing (NGS) have become more accessible and widely available technology to detect genetic causations of diseases. While NGS technology has already benefited different clinical phenotypes, some areas have adapted less quickly than others, as in seizures and epileptic disorders, where genetic diagnosis were mainly based on epilepsy gene panels and not whole exome and/or genome sequencing. Method: We retrospectively analyzed 689 cases that have been sent for NGS over period of 18 months to investigate challenges in diagnosing epilepsy. Result: 74 (10.7%) cases out of 689 cases were sent for epilepsy, half of these cases have a positive family history. The results of NGS were divided as the following: 39 (52.7%) cases were negative, 26 positive cases (35%), and 11 inconclusive cases (14.8%). Out of the inconclusive and positive cases, only one gene has been detected twice in different cases. Comparative Genomic Hybridization (CGH) has been performed for all negative cases, only one case showed de novo duplication in 2q24.3. Conclusion: These findings have implications for our understanding of genetic testing approach and genetic counseling for patients affected with seizures and epilepsy disorders. The overall diagnostic yield of exome/genome sequencing in our cohort was 35%. And the main characteristics is genetic heterogeneity suggests NGS technology as suitable testing approach for seizures and epilepsy disorders. Genetic counseling for newly identified disease-causing variants depends on pedigree interpretation keeping in mind disease penetrance and variable expressivity.

Biography :

Lamia F Alsubaie is a Senior Genetic Counselor at the National Guard Health Affairs in Riyadh, KSA since 2011 and part-time Instructor at Al-Faisal University, College of Medicine. She is working on variant calling and interpretation in genomic medicine since 2015. She holds a Master’s degree in Human Genetics and Genetic Counseling from Joan H. Marks-Human Genetic Program at Sarah Lawrence College in New York, USA. Her main areas of professional interest are cancer genetic counseling, genomic counseling and ethical challenges surrounding genetic testing and genetic information sharing.